Search results for " Admixture"

showing 10 items of 17 documents

A hierarchical Bayesian Beta regression approach to study the effects of geographical genetic structure and spatial autocorrelation on species distri…

2019

Global climate change (GCC) may be causing distribution range shifts in many organisms worldwide. Multiple efforts are currently focused on the development of models to better predict distribution range shifts due to GCC. We addressed this issue by including intraspecific genetic structure and spatial autocorrelation (SAC) of data in distribution range models. Both factors reflect the joint effect of ecoevolutionary processes on the geographical heterogeneity of populations. We used a collection of 301 georeferenced accessions of the annual plant Arabidopsis thaliana in its Iberian Peninsula range, where the species shows strong geographical genetic structure. We developed spatial and nonsp…

0106 biological sciences0301 basic medicineHierarchical Bayesian modelsArabidopsis thalianaRange (biology)Bayesian probabilitySpecies distributionArabidopsisGenetic admixtureBiologyResidual010603 evolutionary biology01 natural sciences03 medical and health sciencesAfrica NorthernStatisticsGeneticsSpatial analysisEcology Evolution Behavior and SystematicsSpatial AnalysisPortugalPlant DispersalGenetic heterogeneityGlobal climate changePhylogeographyGenetics Population030104 developmental biologySpainGenetic structureGeographic genetic structureMaxentPeptidesSpatial autocorrelationBiotechnology
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Unravelling the scientific debate on how to address wolf-dog hybridization in Europe

2019

Anthropogenic hybridization is widely perceived as a threat to the conservation of biodiversity. Nevertheless, to date, relevant policy and management interventions are unresolved and highly convoluted. While this is due to the inherent complexity of the issue, we hereby hypothesize that a lack of agreement concerning management goals and approaches, within the scientific community, may explain the lack of social awareness on this phenomenon, and the absence of effective pressure on decision-makers. By focusing on wolf x dog hybridization in Europe, we hereby (a) assess the state of the art of issues on wolf x dog hybridization within the scientific community, (b) assess the conceptual base…

0106 biological sciences0301 basic medicineconservation; delphi technique; genetic admixture; introgression; lethal removal; management; ethics; values in sciencelethal removallcsh:EvolutionPsychological interventionDelphi methodConservation; Delphi technique; Ethics; Genetic admixture; Introgression; Lethal removal; Management; Values in science;01 natural sciencesHYBRIDSATLANTIC SALMONlcsh:QH359-425ComputingMilieux_MISCELLANEOUSEcologyINTROGRESSIONconservationPublic relationsViewpointsConservation; Delphi technique; Ethics; Genetic admixture; Introgression; Lethal removal; Management; Values in scienceADMIXTUREDOMESTIC DOGSIdentification (biology)C180 EcologyDisciplinemanagementDETECTING HYBRIDIZATIONCONSERVATIONintrogressionC170 Population Biology010603 evolutionary biology03 medical and health sciencesWOLVESlcsh:QH540-549.5Political scienceValues in scienceMANAGEMENTSocial consciousnessEcology Evolution Behavior and SystematicsEthicsC300 Zoologybusiness.industryInterpretation (philosophy)C182 Evolutionconservation ; delphi technique ; genetic admixture ; introgression ; lethal removal ; management ; ethics ; values in science15. Life on landethics030104 developmental biologyConceptual frameworklcsh:Ecologydelphi techniquevalues in science[SDE.BE]Environmental Sciences/Biodiversity and EcologyCONSENSUSbusinessgenetic admixture
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Gene flow and population admixture as the primary post-invasion processes in common ragweed (Ambrosia artemisiifolia) populations in France

2010

*An improved inference of the evolutionary history of invasive species may be achieved by analyzing the genetic variation and population differentiation of recently established populations and their ancestral (historical) populations. Employing this approach, we investigated the role of gene flow in the post-invasion evolution of common ragweed (Ambrosia artemisiifolia). *Using eight microsatellite loci, we compared genetic diversity and structure among nine pairs of historical and recent populations in France. Historical populations were reconstructed from herbarium specimens dated from the late 19th to early 20th century, whereas recent populations were collected within the last 5 yr. *Re…

0106 biological sciencesPhysiologyHISTORICAL POPULATIONSPopulation DynamicsPopulationPopulation geneticsPlant ScienceBiology010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesHERBARIUM SPECIMENGenetic variationGENE FLOWCluster AnalysiseducationPhylogenyAmbrosia artemisiifoliaPOPULATION HISTORIQUE030304 developmental biologyPrincipal Component Analysis0303 health scienceseducation.field_of_studyGenetic diversityGeographyEcologyGenetic Variation[ SDV.BV.PEP ] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBayes TheoremGene Pool15. Life on landbiology.organism_classificationINVASIVE SPECIESESPECES ENVAHISSANTES[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyAMBROSIA ARTEMISIIFOLIA(COMMON RAGWEED)Genetic distanceEvolutionary biologyPOPULATION ADMIXTUREFranceGene poolAmbrosiaPOST-INVASION PROCESS
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Genetic admixture despite ecological segregation in a North African sparrow hybrid zone (Aves, Passeriformes, Passer domesticus × Passer hispaniolens…

2019

Under different environmental conditions, hybridization between the same species might result in different patterns of genetic admixture. Particularly, species pairs with large distribution ranges and long evolutionary history may have experienced several independent hybridization events over time in different zones of overlap. In birds, the diverse hybrid populations of the house sparrow (Passer domesticus) and the Spanish sparrow (Passer hispaniolensis) provide a striking example. Throughout their range of sympatry, these two species do not regularly interbreed; however, a stabilized hybrid form (Passer italiae) exists on the Italian Peninsula and on several Mediterranean islands. The spa…

0106 biological sciencesSympatrymicrosatelliteBiologíaPopulationintrogressionMICROSATELLITESZoologyGenetic admixturemitochondrial DNAZ-chromosome010603 evolutionary biology01 natural sciencesmicrosatellites//purl.org/becyt/ford/1 [https]Ciencias Biológicas03 medical and health sciencesHybrid zonelcsh:QH540-549.5biology.animalZ-CHROMOSOMEItalian sparroweducation//purl.org/becyt/ford/1.6 [https]hybridizationEcology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape ConservationSpanish sparrow0303 health scienceseducation.field_of_studySparrowEcologybiologyINTROGRESSION15. Life on landbiology.organism_classificationlcsh:EcologyMITOCHONDRIAL DNAPasserZ‐chromosomeHYBRIDIZATIONCIENCIAS NATURALES Y EXACTAS
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Shared language, diverging genetic histories: high-resolution analysis of Y-chromosome variability in Calabrian and Sicilian Arbereshe.

2015

The relationship between genetic and linguistic diversification in human populations has been often explored to interpret some specific issues in human history. The Albanian-speaking minorities of Sicily and Southern Italy (Arbereshe) constitute an important portion of the ethnolinguistic variability of Italy. Their linguistic isolation from neighboring Italian populations and their documented migration history, make such minorities particularly effective for investigating the interplay between cultural, geographic and historical factors. Nevertheless, the extent of Arbereshe genetic relationships with the Balkan homeland and the Italian recipient populations has been only partially investi…

0301 basic medicineMaleGenetics; Genetics (clinical)PopulationY-chromosome variabilityPopulationSettore BIO/08 - ANTROPOLOGIAPopulation geneticsGenetic admixtureHomelandgenetics (clinical)Diversification (marketing strategy)Population stratificationChromosomesArticle03 medical and health sciencesGeneticModelsGenetic variationHumansgeneticseducationLanguageeducation.field_of_studygenetics (clinical); geneticsChromosomes Human YY chromosomeModels GeneticMediterranean Regionpopulation geneticsGenetic Variationlanguage.human_languageY-ChromosomeChromosomes Human Y; Female; Humans; Italy; Male; Mediterranean Region; Pedigree; Population; Genetic Variation; Language; Models GeneticPedigreeHuman Population Genetics Y chromosome Arbereshe linguistic minorities genetic isolates admixture simulations micro-evolutionary history Southern Italy030104 developmental biologyGeographyItalyEvolutionary biologylanguageArbereshe linguistic minorityArbreshFemaleSicilianSicily and CalabriaYHumanEuropean journal of human genetics : EJHG
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The Role of Recent Admixture in Forming the Contemporary West Eurasian Genomic Landscape

2015

Summary Over the past few years, studies of DNA isolated from human fossils and archaeological remains have generated considerable novel insight into the history of our species. Several landmark papers have described the genomes of ancient humans across West Eurasia, demonstrating the presence of large-scale, dynamic population movements over the last 10,000 years, such that ancestry across present-day populations is likely to be a mixture of several ancient groups [1, 2, 3, 4, 5, 6, 7]. While these efforts are bringing the details of West Eurasian prehistory into increasing focus, studies aimed at understanding the processes behind the generation of the current West Eurasian genetic landsc…

Asian Continental Ancestry GroupGene FlowGenetics and Molecular Biology (all)genetics and molecular biologyEvolutionHuman MigrationEuropean Continental Ancestry GroupPopulationSettore BIO/08 - ANTROPOLOGIABiologyDNA MitochondrialBiochemistryArticleWhite PeopleGeneral Biochemistry Genetics and Molecular BiologyEvolution MolecularArcheology Eurasia.Henomics AdmixtureAsian PeopleSettore BIO/13 - Biologia ApplicataReportGeneticsHumansComputer Simulationagricultural and biological sciencesPhylogenyAgricultural and Biological Sciences(all)Biochemistry Genetics and Molecular Biology(all)FossilsGenetic VariationMolecularDNAGenomicsMitochondrialAsian Continental Ancestry Group; Computer Simulation; DNA Mitochondrial; European Continental Ancestry Group; Fossils; Genetic Variation; Genetics Population; Genomics; Haplotypes; Humans; Phylogeny; Evolution Molecular; Gene Flow; Human Migration; Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Genetics PopulationHaplotypesAgricultural and Biological Sciences (all)Evolutionary biologyadmixtureCurrent (fluid)agricultural and biological sciences; biochemistry; genetics and molecular biologyGeneral Agricultural and Biological ScienceseuropeCurrent Biology
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Perspectives for CNO neutrino detection in Borexino

2018

International audience; Borexino measured with unprecedented accuracy the fluxes of solar neutrinos emitted at all the steps of the pp fusion chain. Still missing is the measurement of the flux of neutrinos produced in the CNO cycle. A positive measurement of the CNO neutrino flux is of fundamental importance for understanding the evolution of stars and addressing the unresolved controversy on the solar abundances. The measurement of the CNO neutrino flux in Borexino is challenging because of the low intensity of this component (CNO cycle accounts for about 1% of the energy emitted by Sun), the lack of prominent spectral features and the presence of background sources. The main background c…

CNO cycleexperimental methodsneutrino: solarPhysics::Instrumentation and DetectorsSolar neutrinoAstrophysics::High Energy Astrophysical Phenomenascintillation counter: liquidSolar neutrinosbismuth: admixtureAstrophysics[PHYS.NEXP]Physics [physics]/Nuclear Experiment [nucl-ex]7. Clean energySolar neutrinoCNO-cycleneutrino: fluxAstrophysics::Solar and Stellar Astrophysics[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det]Stellar evolutionBorexinoliquid scintillatorAstrophysics::Galaxy AstrophysicsPhysicsEnergy distributiondetectorbackgroundbismuth: nuclideCNO cycleNeutrino detector13. Climate actionBorexinoExperimental methodsNeutrino
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Distillation and stripping pilot plants for the JUNO neutrino detector: Design, operations and reliability

2019

Abstract This paper describes the design, construction principles and operations of the distillation and stripping pilot plants tested at the Daya Bay Neutrino Laboratory, with the perspective to adapt these processes, system cleanliness and leak-tightness standards to the final full scale plants to be used for the purification of the liquid scintillator of the JUNO neutrino detector. The main goal of these plants is to remove radio impurities from the liquid scintillator while increasing its optical attenuation length. Purification of liquid scintillator will be performed with a system combining alumina oxide, distillation, water extraction and steam (or N 2 gas) stripping. Such a combined…

Large-scale experimentNuclear and High Energy PhysicsPhysics - Instrumentation and DetectorsLiquid scintillatorAttenuation length; LAB; Large-scale experiments; Light yield; Liquid scintillator; Nitrogen purging; Radiopurity; Scintillator transparency; Nuclear and High Energy Physics; Instrumentationscintillation counter: liquidMixing (process engineering)Full scaleFOS: Physical sciencesRadiopurityfabricationScintillator01 natural sciences7. Clean energyStripping (fiber)law.inventionNOlaw0103 physical sciencesthorium: admixtureAttenuation length; LAB; Large-scale experiments; Light yield; Liquid scintillator; Nitrogen purging; Radiopurity; Scintillator transparency[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det]010306 general physicsProcess engineeringDistillationInstrumentationbackground: radioactivityNuclear and High Energy PhysicPhysicsLABJUNOLarge-scale experiments010308 nuclear & particles physicsbusiness.industryuranium: admixtureSettore FIS/01 - Fisica SperimentaleAttenuation lengthInstrumentation and Detectors (physics.ins-det)Attenuation lengthNitrogen purgingNeutrino detectorScintillator transparencyNeutrinobusinessaluminum: oxygenLight yield
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Successive Invasion-Mediated Interspecific Hybridizations and Population Structure in the Endangered Cichlid Oreochromis mossambicus.

2013

Hybridization between invasive and native species accounts among the major and pernicious threats to biodiversity. The Mozambique tilapia Oreochromis mossambicus, a widely used freshwater aquaculture species, is especially imperiled by this phenomenon since it is recognized by the IUCN as an endangered taxon due to genetic admixture with O. niloticus an invasive congeneric species. The Lower Limpopo and the intermittent Changane River (Mozambique) drain large wetlands of potentially great importance for conservation of O. mossambicus, but their populations have remained unstudied until today. Therefore we aimed (1) to estimate the autochthonous diversity and population structure among genet…

Male0106 biological sciencesConservation geneticsintraspecific hybridization[SDV.BA] Life Sciences [q-bio]/Animal biologyIntrogression[SDV]Life Sciences [q-bio]Endangered speciesBiodiversityLimnetic Ecologylcsh:MedicinePopulation geneticsIntroduced speciesAquaculture01 natural sciencesstructure de la populationIUCN Red Listhttp://aims.fao.org/aos/agrovoc/c_35412Amplified Fragment Length Polymorphism Analysislcsh:ScienceMozambiquePhylogenyComputingMilieux_MISCELLANEOUShybridation intraspécifiqueAnimal ManagementConservation ScienceFreshwater Ecology0303 health sciencesMultidisciplinaryEcologybiologyEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyAgricultureBiodiversityGene Pool[SDV] Life Sciences [q-bio][ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]FemaleFish FarmingTilapiaResearch ArticleGene FlowOreochromis mossambicusEvolutionary Processesoreochromis mossambicusGenotypeMolecular Sequence DataAgro-Population EcologyGenetic admixture[SDV.BID]Life Sciences [q-bio]/BiodiversityDNA Mitochondrial010603 evolutionary biology03 medical and health sciencesRiversSpecies SpecificityGeneticsAnimalsespèce invasive14. Life underwaterAdaptationBiologyHybridizationSpecies Extinction030304 developmental biology[ SDV.BID ] Life Sciences [q-bio]/BiodiversityEvolutionary Biology[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Endangered Specieslcsh:RGenetic VariationBayes Theorempopulation structureSequence Analysis DNA15. Life on landL10 - Génétique et amélioration des animauxbiology.organism_classificationGenetics PopulationHaplotypesGenetic PolymorphismHybridization Geneticlcsh:QM12 - Production de l'aquaculturehttp://aims.fao.org/aos/agrovoc/c_4964[SDE.BE]Environmental Sciences/Biodiversity and EcologyIntroduced SpeciesAnimal GeneticsAgroecologyPopulation Genetics
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The Greeks in the West: genetic signatures of the Hellenic colonisation in southern Italy and Sicily

2015

Greek colonisation of South Italy and Sicily (Magna Graecia) was a defining event in European cultural history, although the demographic processes and genetic impacts involved have not been systematically investigated. Here, we combine high-resolution surveys of the variability at the uni-parentally inherited Y chromosome and mitochondrial DNA in selected samples of putative source and recipient populations with forward-in-time simulations of alternative demographic models to detect signatures of that impact. Using a subset of haplotypes chosen to represent historical sources, we recover a clear signature of Greek ancestry in East Sicily compatible with the settlement from Euboea during the…

Male0301 basic medicineDIVERSITYPopulation geneticsSicilyPhylogenyGenetics (clinical)POPULATIONGeneticseducation.field_of_studyGeographyGreecehuman population geneticEcologyY-CHROMOSOMEY-CHROMOSOME; POPULATION; ADMIXTURE; LINEAGES; MUTATIONS; DIVERSITY; MODELS; PAIR; TIME; WAVETIMEADMIXTUREFemaleGreeksPopulationMODELSSouth ItalySettore BIO/08 - ANTROPOLOGIABiologyArchaic periodArticleY-CHROMOSOME ; POPULATION ; LINEAGES ; ADMIXTURE ; MUTATIONS ; DIVERSITY ; EXPANSION ; ANCESTOR ; HISTORY ; MODELS03 medical and health sciencesPAIRDemography; Female; Geography; Greece; Haplotypes; Humans; Male; Mutation; Phylogeny; Sicily; Genetics Population; Genetics; Genetics (clinical)GeneticsHumansAncient Greeks population geneticseducationDemographygenetics (clinical); geneticsY chromosomeMUTATIONSHaplotypeLINEAGESpopulation geneticsColonisationGenetics Population030104 developmental biologyHaplotypesGreek ancestryMutationgenetic markersWAVE
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